wwguy wrote:From your description it sounds like one or more of the 3 diodes have failed in the closed circuit state. This would permit battery voltage to flow through them in the wrong direction, thus powering some circuits that are intended to only intended to be run from stator power when the engine is running.
If you have a close look at the wiring diagram in your owner's manual you'll see that the 12v battery is only connected to the electric starter motor and relay. The diodes are basically one-way electrical "valves" that permit the stator to recharge the battery after the bike is running. Everything else electrical on the bike runs off of the stator powered by the engine. Thus the fan shouldn't ever be able to run when the engine is off.
If my guess is true you'll probably also see the 12v battery go flat if the bike is parked for a few days. Th 4700uF capacitor on the stator-powered harness will likely deplete the battery slowly if stator and battery circuits are connected together.
I hadn't had any more issues since I started this thread but it seems as if you may be correct about the diodes.
I didn't ride the bike for a couple of weeks and today my 3 month old Shorai lithium battery was so dead it wouldn't even turn over the engine. Glad I got that kick starter kit!
After riding for about 20 minutes or so the battery was charged enough to use the electric starter again so the charging system seems to be functioning OK.
Any chance you know of part numbers for the diodes and where I would find them in the harness? I'm thinking I might as well just replace them all.